Bibliopedia is an open source, semantic wiki research platform designed to crawl scholarly resources including JSTOR, the Library of Congress, the Arts and Humanities Citation Index, and similar data sources, extract metadata about works cited, convert that data into a semantic web format, aggregate the different repositories, then display the results on a wiki-style website for the scholarly community to verify, add to, annotate, elaborate, and discuss.

BuzzData is a user-friendly, versatile data-sharing software.

Coggle is a simple, beautiful way of structuring information that you can use to collaborate in real-time with others.

It supports LaTeX and Markdown formatting (use LaTeX via the \\( \\) or \\[ \\] escape sequences), images can be added by drag & drop, you can view the change history of each diagram, and documents can be downloaded as PDFs or images.

Amongst many other things, Coggle is used for:

CoCoCo is an application for collecting, cataloging, and assessing the quality of user-submitted text or uploaded-file contributions.

DM is an environment for the study and annotation of images and texts. It is a suite of tools, enabling scholars to gather and organize the evidence necessary to support arguments based in digitized resources. DM enables users to mark fragments of interest in manuscripts, print materials, photographs, etc. and provide commentary on these resources and the relationships among them.

Edit Flow gives you custom statuses, a calendar, editorial comments, and more, all to make it much easier for your team to collaborate within WordPress.

Evernote is note-taking software in the cloud, with options for private and shared notebooks. Users can take text notes, and upload files to attach them to notes. Evernote has built-in OCR for images with printed or handwritten text. A premium account allows access to notebooks offline, as well as more storage and embedded PDF search.
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Google Docs is an online environment for editing and sharing documents, spreadsheets, presentations, forms, drawings, and tables. Google Docs documents can be public or private, or shared with anyone with a Google account.

HUBzero is a web publication platform intended for research software and educational materials. HUBzero's most distinctive traits are a built-in environment that can run software that scholars have developed within the browser, a tool development area, the ability to post web-based presentations associated with tools.